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Nature Communications 2025 2025-04

ESM-Ezy: a deep learning strategy for the mining of novel multicopper oxidases with superior properties

Published in Nature Communications, 2025

ESM-1b semantic mining discovers multicopper oxidases with superior catalytic and environmental-remediation properties from UniProt.

ESM-Ezy is a deep learning enzyme mining strategy that uses the ESM-1b protein language model and semantic space similarity calculations to discover novel multicopper oxidases (MCOs) with superior catalytic properties from the UniProt database. The strategy achieved a 44% success rate in identifying MCOs that outperform query enzymes in at least one catalytic property.

Citation

H Qian, Y Wang, X Zhou, T Gu, H Wang, H Lyu, Z Li, X Li, H Zhou, C Guo, et al. (2025). "ESM-Ezy: a deep learning strategy for the mining of novel multicopper oxidases with superior properties." Nature Communications 16, 3274.